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      The origin and biosynthesis of the naphthalenoid moiety of juglone in black walnut

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          Abstract

          Several members of the Juglandaceae family produce juglone, a specialized 1,4-naphthoquinone (1,4-NQ) natural product that is responsible for the notorious allelopathic effects of black walnut ( Juglans nigra). Despite its documented ecological roles and potential for being developed as a novel natural product-based herbicide, none of the genes involved in synthesizing juglone have been identified. Based on classical labeling studies, we hypothesized that biosynthesis of juglone’s naphthalenoid moiety is shared with biochemical steps of the phylloquinone pathway. Here, using comparative transcriptomics in combination with targeted metabolic profiling of 1,4-NQs in various black walnut organs, we provide evidence that phylloquinone pathway genes involved in 1,4-dihydroxynaphthoic acid (DHNA) formation are expressed in roots for synthesis of a compound other than phylloquinone. Feeding experiments using axenic black walnut root cultures revealed that stable isotopically labeled l-glutamate incorporates into juglone resulting in the same mass shift as that expected for labeling of the quinone ring in phylloquinone. Taken together, these results indicate that in planta, an intermediate from the phylloquinone pathway provides the naphthalenoid moiety of juglone. Moreover, this work shows that juglone can be de novo synthesized in roots without the contribution of immediate precursors translocated from aerial tissues. The present study illuminates all genes involved in synthesizing the juglone naphthoquinone ring and provides RNA-sequencing datasets that can be used with functional screening studies to elucidate the remaining juglone pathway genes. Translation of the generated knowledge is expected to inform future metabolic engineering strategies for harnessing juglone as a novel natural product-based herbicide.

          Bioengineering: revealing the genetic roots of a potential natural herbicide

          Revealing the synthetic pathway of the natural herbicide juglone paves the way for genetically engineered, weed-resistant crops. Juglone, belonging to the same molecular family as phylloquinone (also known as vitamin K 1), is produced by plants, including black walnut and is generally toxic to nearby plant life. Until now, the genetic and synthetic basis of juglone remained unknown. Using genetic analysis, a research team from the United States’ Purdue University, led by Joshua Widhalm, discovered that juglone is actually a product of the same synthetic pathway as phylloquinone and shares the same progenitor—a molecule called DHNA. This study partially reveals the genes responsible for juglone synthesis, and the authors suggest that the next step involves elucidating how the chemical is produced from DHNA. This discovery informs future efforts to engineer resilience into important crops.

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          Most cited references35

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          Distribution of superoxide and hydrogen peroxide in Arabidopsis root and their influence on root development: possible interaction with peroxidases.

          The respective distribution of superoxide (O(2) (.-)) and hydrogen peroxide (H(2)O(2)), two reactive oxygen species (ROS) involved in root growth and differentiation, was determined within the Arabidopsis root tip. We investigated the effect of changing the levels of these ROS on root development and the possible interactions with peroxidases. H(2)O(2) was detected by confocal laser-scanning microscopy using hydroxyphenyl fluorescein (HPF). Both O(2) (.-) accumulation and peroxidase distribution were assessed by light microscopy, using nitroblue tetrazolium (NBT) and o-dianisidine, respectively. Root length and root hair length and density were also quantified following ROS scavenging. O(2) (.-) was predominantly located in the apoplast of cell elongation zone, whereas H(2)O(2) accumulated in the differentiation zone and the cell wall of root hairs in formation. Treatments that decrease O(2) (.-) concentration reduced root elongation and root hair formation, while scavenging H(2)O(2) promoted root elongation and suppressed root hair formation. The results allow to precise the respective role of O(2) (.-) and H(2)O(2) in root growth and development. The consequences of their distinct accumulation sites within the root tip are discussed, especially in relation to peroxidases.
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            A familiar ring to it: biosynthesis of plant benzoic acids.

            Plant benzoic acids (BAs) are building blocks or important structural elements for numerous primary and specialized metabolites, including plant hormones, cofactors, defense compounds, and attractants for pollinators and seed dispersers. Many natural products derived from plant BAs or containing benzoyl/benzyl moieties are also of medicinal or nutritional value to humans. Biosynthesis of BAs in plants is a network involving parallel and intersecting pathways spread across multiple subcellular compartments. In this review, a current overview on the metabolism of plant BAs is presented with a focus on the recent progress made on isolation and functional characterization of genes encoding biosynthetic enzymes and intracellular transporters. In addition, approaches for deciphering the complex interactions between pathways of the BAs network are discussed.
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              Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of Arabidopsis.

              Salicylic acid (SA) is an important mediator of plant defense response. In Arabidopsis (Arabidopsis thaliana), this compound was proposed to derive mainly from isochorismate, itself produced from chorismate through the activity of ISOCHORISMATE SYNTHASE1 (ICS1). Null ics1 mutants still accumulate some SA, suggesting the existence of an enzymatic activity redundant with ICS1 or of an alternative ICS-independent SA biosynthetic route. Here, we studied the role of ICS2, a second ICS gene of the Arabidopsis genome, in the production of SA. We have shown that ICS2 encodes a functional ICS enzyme and that, similar to ICS1, ICS2 is targeted to the plastids. Comparison of SA accumulation in the ics1, ics2, and ics1 ics2 mutants indicates that ICS2 participates in the synthesis of SA, but in limited amounts that become clearly detectable only when ICS1 is lacking. This unequal redundancy relationship was also observed for phylloquinone, another isochorismate-derived end product. Furthermore, detection of SA in the double ics1 ics2 double mutant that is completely devoid of phylloquinone provides genetic evidence of the existence of an ICS-independent SA biosynthetic pathway in Arabidopsis.
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                Author and article information

                Contributors
                +1 765 496 3891 , jwidhalm@purdue.edu
                Journal
                Hortic Res
                Hortic Res
                Horticulture Research
                Nature Publishing Group UK (London )
                2052-7276
                1 November 2018
                1 November 2018
                2018
                : 5
                : 67
                Affiliations
                [1 ]ISNI 0000 0004 1937 2197, GRID grid.169077.e, Department of Horticulture and Landscape Architecture, , Purdue University, ; 625 Agriculture Mall Drive, West Lafayette, IN 47907 USA
                [2 ]ISNI 0000 0004 1937 2197, GRID grid.169077.e, Purdue Center for Plant Biology, , Purdue University, ; West Lafayette, IN 47907 USA
                [3 ]ISNI 0000 0004 1937 2197, GRID grid.169077.e, Bioinformatics Core, , Purdue University, ; 155 South Grant Street, West Lafayette, IN 47907 USA
                Author information
                http://orcid.org/0000-0002-3453-1948
                http://orcid.org/0000-0002-2703-4740
                Article
                67
                10.1038/s41438-018-0067-5
                6210188
                30393541
                fff311a9-865f-4da6-9724-25fc6b579203
                © The Author(s) 2018

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 23 February 2018
                : 14 June 2018
                : 17 June 2018
                Funding
                Funded by: Showalter Trust Fund award for bioinformatics support from Purdue University.
                Funded by: National Science Foundation Graduate Research Fellowship Program under Grant No. DGE-1333468
                Categories
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                © The Author(s) 2018

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